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Optimal characterization of thermal microbial inactivation simulating non-isothermal processes
Alberto Garre, Gerardo A. González-Tejedor, Jose Lucas Peñalver-Soto, Pablo Sanz Fernández, Jose A. Egea , Food research international , 2018RFree
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The OpenCPU System: Towards a Universal Interface for Scientific Computing through Separation of Concerns
Jeroen Ooms , ArXiv , 2014RFree
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OpenML: An R Package to Connect to the Machine Learning Platform OpenML
Giuseppe Casalicchio, Jakob Bossek, Michel Lang, Dominik Kirchhoff, Pascal Kerschke , et al. , COMPUTATIONAL STATISTICS , 2019RFree
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Model-Based Clustering and Classification of Functional Data
Faicel Chamroukhi, Hien D. Nguyen , Wiley Interdiscip. Rev. Data Min. Knowl. Discov. , 2018RFree
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A Tutorial on RxODE: Simulating Differential Equation Pharmacometric Models in R
Winston Wang, K. M. Hallow, Da James , CPT: pharmacometrics & systems pharmacology , 2016RFree
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Bayesian Network Constraint-Based Structure Learning Algorithms: Parallel and Optimized Implementations in the bnlearn R Package
Marco Scutari , JOURNAL OF STATISTICAL SOFTWARE , 2017RFree
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The Liability Threshold Model for Censored Twin Data
Klaus K. Holst, Thomas H. Scheike, Jacob v. B. Hjelmborg , Computational Statistics & Data Analysis , 2016RFree
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Data-based RNA-seq Simulations by Binomial Thinning
David Gerard , BIORXIV , 2019RFree
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CHNOSZ: Thermodynamic calculations and diagrams for geochemistry
JanniceA. M. Dick , Front. Earth Sci. , 2019RFree
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Penalized Count Data Regression with Application to Hospital Stay after Pediatric Cardiac Surgery
Zhu Wang, Shuangge Ma, Michael Zappitelli, Chirag R Parikh, Ching-Yun Wang, Prasad Devarajan , Statistical methods in medical research , 2016RFree
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A phylogenetic comparative method for studying multivariate adaptation
Krzysztof Bartoszek, Jason Pienaar, Petter Mostad, Staffan Andersson, Thomas F Hansen , Journal of theoretical biology , 2012RFree
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Genotyping Polyploids from Messy Sequencing Data
David Gerard, Luis Felipe Ventorim Ferrão, Antonio Augusto Franco Garcia, Matthew Stephens , Genetics , 2018RFree
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AGHmatrix: R Package to Construct Relationship Matrices for Autotetraploid and Diploid Species: A Blueberry Example
Rodrigo R. Amadeu, Catherine Cellon, James W. Olmstead, Antonio Augusto Franco Garcia, Márcio F. R. Resende, Patrício Rodrigo Montecinos Muñoz , The plant genome , 2016RFree
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quanteda: An R package for the quantitative analysis of textual data
Kenneth Benoit, Kohei Watanabe, +4 authors Akitaka Matsuo , J. Open Source Software , 2018RFree
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Nonparametric Stein-type Shrinkage Covariance Matrix Estimators in High-Dimensional Settings
Anestis Touloumis , Computational Statistics & Data Analysis , 2015RFree
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tidyLPA: An R Package to Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software
Joshua M. Rosenberg, Patrick N. Beymer, Daniel J. Anderson, Jennifer A. Schmidt , J. Open Source Software , 2018RFree
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Analyzing Competing Risk Data Using the R timereg Package
Thomas H. Scheike, Mei-Jie Zhang , Journal of statistical software , 2011RFree
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Efficient comparative phylogenetics on large trees
Stilianos Louca, Michael Doebeli , Bioinformatics , 2018RFree
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LAGOS-NE: a multi-scaled geospatial and temporal database of lake ecological context and water quality for thousands of US lakes
Patricia A Soranno, Linda C. Bacon, +77 authors Shuai Yuan , GigaScience , 2017RFree
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Randomized Matrix Decompositions Using R
N. Benjamin Erichson, Sergey Voronin, Steven L. Brunton, J. Nathan Kutz , ArXiv , 2016RFree
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tidytext: Text Mining and Analysis Using Tidy Data Principles in R
Julia Silge, David Robinson , J. Open Source Software , 2016RFree
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Baseline and power analyses for the assessment of beach litter reductions in the European OSPAR region
Marcus Schulz, Dennis J. J. Walvoort, Jon Barry, David M. Fleet, Willem van Loon , Environmental pollution , 2019RFree
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PACVr: Plastome Assembly Coverage Visualization in R
Michael Gruenstaeudl, Nils Jenke , BIORXIV , 2019RFree
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A Novel Profit Maximizing Metric for Measuring Classification Performance of Customer Churn Prediction Models
Thomas Verbraken, Wouter Verbeke, Bart Baesens , IEEE Transactions on Knowledge and Data… , 2013RFree
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Should we stop looking for a better scoring algorithm for handling Implicit Association Test data? Test of the role of errors, extreme latencies treatment, scoring formula, and practice trials on reliability and validity
Juliette Richetin, Giulio Costantini, Marco Perugini, Felix D. Schönbrodt , PLOS ONE , 2015RFree
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Integrating omics datasets with the OmicsPLS package
Said el Bouhaddani, Hae-Won Uh, +4 authors Jeanine J. Houwing-Duistermaat , BMC Bioinformatics , 2018RFree
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Empowering Multi-Cohort Gene Expression Analysis to Increase Reproducibility
Winston Haynes, Francesco Vallania, +9 authors Purvesh Khatri , PSB , 2017RFree
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Panel Data Econometrics in R: The plm Package
Yves Croissant, Giovanni Millo Laboratoire d'économie des transports, Dipartimento di Scienze Economiche e Statistiche (Department of Economics and Statistics) , JOURNAL OF STATISTICAL SOFTWARE , 2008RFree
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Likelihood approach for count data in longitudinal experiments
M. Helena Gonçalves, M. Salomé Cabral, Maria Carme Ruiz de Villa, Eduardo Escrich, Montse Solanas , Computational Statistics & Data Analysis , 2007RFree
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A method of sexing the human os coxae based on logistic regressions and Bruzek’s nonmetric traits
Frédéric Santos, Pierre Guyomarc'h, Rebeka Rmoutilová, Jaroslav Brůžek , American journal of physical anthropology , 2019RFree
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The drake R package: a pipeline toolkit for reproducibility and high-performance computing
William Michael Landau , J. Open Source Software , 2018RFree
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pROC: an open-source package for R and S+ to analyze and compare ROC curves
Xavier Robin, Natacha Turck, +4 authors Markus Müller , BMC Bioinformatics , 2010RFree
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AnthropMMD: an R package with a graphical user interface for the mean measure of divergence
Frédéric Santos , American journal of physical anthropology , 2018RFree
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fastJT: An R package for robust and efficient feature selection for machine learning and genome-wide association studies
Jiaxing Lin, Alexander B. Sibley, +4 authors Kouros Owzar , BMC Bioinformatics , 2019RFree
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partykit: A Modular Toolkit for Recursive Partytioning in R
Torsten Hothorn, Achim Zeileis , J. Mach. Learn. Res. , 2015RFree
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RKEEL: Using KEEL in R code
Jose M. Moyano, Luciano Sánchez , IEEE International Conference on Fuzzy Systems… , 2016RFree
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Spatial association between regionalizations using the information-theoretical V-measure
Jakub Nowosad, Tomasz F. Stepinski , International Journal of Geographical Information… , 2018RFree
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RcppArmadillo: Accelerating R with high-performance C++ linear algebra
Dirk Eddelbuettel, Conrad Sanderson , Computational Statistics & Data Analysis , 2014RFree
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rsimsum: Summarise results from Monte Carlo simulation studies
Alessandro Gasparini, Michel Lang , J. Open Source Software , 2018RFree
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XGR software for enhanced interpretation of genomic summary data, illustrated by application to immunological traits
Hai Hong Fang, Bogdan Knezevic, Katie L Burnham, Julian C. Knight , Genome Medicine , 2016RFree
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rehh: An R package to detect footprints of selection in genome-wide SNP data from haplotype structure
Mathieu Gautier, Renaud Vitalis , Bioinformatics , 2012RFree
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Visualizing balances of compositional data: A new alternative to balance dendrograms
Thomas P. Quinn , F1000Research , 2018RFree
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Standard anatomical and visual space for the mouse retina: computational reconstruction and transformation of flattened retinae with the Retistruct package
David C. Sterratt, Daniel Lyngholm, David J. Willshaw, Ian D. Thompson , PLoS Computational Biology , 2013RFree
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Coala: an R framework for coalescent simulation
Paul R. Staab, Dirk Metzler , Bioinformatics , 2016RFree
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Automatic thresholding from the gradients of region boundaries
Gabriel Landini, David A. Randell, Shereen Fouad, Antony Galton , Journal of microscopy , 2017RFree
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Interpreting observational studies: why empirical calibration is needed to correct p-values
Martijn J. Schuemie, Patrick B. Ryan, William DuMouchel, Marc A. Suchard, David Madigan , Statistics in medicine , 2014RFree
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mclust 5: clustering, classification and density estimation using Gaussian finite mixture models
Luca Scrucca, Michael Fop, Thomas Brendan Murphy, Adrian E. Raftery , The R journal , 2016RFree
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DALEX: Explainers for Complex Predictive Models in R
Przemyslaw Biecek , J. Mach. Learn. Res. , 2018RFree
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The harmonic mean p-value for combining dependent tests
Daniel J. Wilson , Proceedings of the National Academy of Sciences… , 2019RFree
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Soundgen: An open-source tool for synthesizing nonverbal vocalizations
Andrey Anikin , Behavior research methods , 2019RFree
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On the visualization, verification and recalibration of ternary probabilistic forecasts
Tim E. Jupp, Rachel Lowe, Caio Augusto Dos Santos Coelho, David B. Stephenson , Philosophical transactions. Series A… , 2012RFree
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Arbitrated Ensemble for Solar Radiation Forecasting
Vítor Cerqueira, Luís Torgo, Carlos Soares , IWANN , 2017RFree
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Improving epidemiologic data analyses through multivariate regression modelling
Fraser Iain Lewis, Michael P Ward , Emerging Themes in Epidemiology , 2013RFree
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Learning infectious disease epidemiology in a modern framework
Andreas Handel , PLoS Computational Biology , 2017RFree
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Autocalibration of accelerometer data for free-living physical activity assessment using local gravity and temperature: an evaluation on four continents
Vincent T van Hees, Zhou Fang, +7 authors Soeren Brage , Journal of applied physiology , 2014RFree
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LeafArea: An R Package for Rapid Digital Image Analysis of Leaf Area
Masatoshi Katabuchi , Ecological Research , 2015RFree
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marmap: A Package for Importing, Plotting and Analyzing Bathymetric and Topographic Data in R
Eric Pante, Benoît Simon-Bouhet , PloS one , 2013RFree
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Guided Random Forest in the RRF Package
Houtao Deng , ArXiv , 2013RFree
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RProtoBuf: Efficient Cross-Language Data Serialization in R
Dirk Eddelbuettel, Murray Stokely, Jeroen Ooms , ArXiv , 2014RFree
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bibliometrix: An R-tool for comprehensive science mapping analysis
Massimo Aria, Corrado Cuccurullo , J. Informetrics , 2017RFree
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Modelling anthelmintic resistance by extending eggCounts package to allow individual efficacy
Craig Wang, Paul R Torgerson, Ray M. Kaplan, Melissa M. George, Reinhard Furrer , International journal for parasitology. Drugs and… , 2018RFree
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Efficient Bayesian Inference for Multivariate Factor Stochastic Volatility Models
Gregor Kastner, Sylvia FrühwirthSchnatter, Hedibert Freitas Lopes , JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS , 2017RFree
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filesstrings: An R package for file and string manipulation
Rory Nolan, Sergi Padilla-Parra , J. Open Source Software , 2017RFree
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rfishbase: exploring, manipulating and visualizing FishBase data from R
Carl Boettiger, Duncan Temple Lang, Peter C. Wainwright , Journal of fish biology , 2012RFree
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The Induced Smoothed lasso: A practical framework for hypothesis testing in high dimensional regression
Giovanna Cilluffo, Gianluca Sottile, Stefania La Grutta, Vito M R Muggeo , Statistical methods in medical research , 2019RFree
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Enabling reproducible real-time quantitative PCR research: the RDML package
Stefan Rödiger, Michal Burdukiewicz, Andrej-Nikolai Spiess, Konstantin Blagodatskikh , Bioinformatics , 2017RFree
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Estimating Psychological Networks and their Accuracy: A Tutorial Paper
Sacha Epskamp, Denny Borsboom, Eiko I Fried , Behavior research methods , 2016RFree
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inlabru: an R package for Bayesian spatial modelling from ecological survey data
Fabian E. Bachl, Finn Lindgren, David L. Borchers, Janine B. Illian , METHODS IN ECOLOGY AND EVOLUTION , 2019RFree
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Estimation and assessment of raw copy numbers at the single locus level
Henrik Bengtsson, Rafael A. Irizarry, Benilton Carvalho, Terence P. Speed , Bioinformatics , 2008RFree
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The Suite of Lumped GR Hydrological Models in an R package
L. Coron, Guillaume Thirel, O. Delaigue, Charles Perrin, Vazken Andréassian , Environmental Modelling and Software , 2017RFree
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BGData – A Suite of R Packages for Genomic Analysis with Big Data
Alexander Grueneberg, Gustavo de los Campos , G3 , 2019RFree
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autoimage: Multiple Heat Maps for Projected Coordinates
Joshua French , The R journal , 2017RFree
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PReMiuM: An R Package for Profile Regression Mixture Models Using Dirichlet Processes
Silvia Liverani, David I. Hastie, Lamiae Azizi, Michail Papathomas, Sylvia Richardson , Journal of statistical software , 2013RFree
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Pedigree reconstruction from SNP data: parentage assignment, sibship clustering and beyond
Jisca Huisman , Molecular ecology resources , 2017RFree
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phangorn: phylogenetic analysis in R
Klaus Peter Schliep , Bioinformatics , 2011RFree
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Causal Structure Learning
Christina HeinzeDeml, Marloes H. Maathuis, Nicolai Meinshausen , ARXIV: METHODOLOGY , 2017RFree
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A hidden Markov model for reconstructing animal paths from solar geolocation loggers using templates for light intensity
Eldar Rakhimberdiev, David W. Winkler, +4 authors Anatoly Saveliev , Movement ecology , 2015RFree
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ergm: A Package to Fit, Simulate and Diagnose Exponential-Family Models for Networks
David R. Hunter, Mark Handcock, Carter T. Butts, Steven Michael Goodreau, Martina Morris , Journal of statistical software , 2008RFree
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Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data
Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson , PLoS Computational Biology , 2014RFree
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Quantile regression neural networks: implementation in R and application to precipitation downscaling
Alex J. Cannon , Computers & Geosciences , 2011RFree
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Numero: a statistical framework to define multivariable subgroups in complex population-based datasets
Song Gao, Stefan Mutter, Aaron E Casey, Ville-Petteri Mäkinen , International journal of epidemiology , 2018RFree
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The Next Generation of the Penn World Table
Robert C. Feenstra, Robert Inklaar, Marcel P. Timmer U CA, Davis, SOM GEM , THE AMERICAN ECONOMIC REVIEW , 2015RFree
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Computation of adherence to medication and visualization of medication histories in R with AdhereR: Towards transparent and reproducible use of electronic healthcare data
Alexandra Lelia Dima, Dan Dediu , PloS one , 2017RFree
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bayesTFR: An R Package for Probabilistic Projections of the Total Fertility Rate
Hana Sevcikova, Leontine Alkema, Adrian E. Raftery , Journal of statistical software , 2011RFree
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sim1000G: a user-friendly genetic variant simulator in R for unrelated individuals and family-based designs
Apostolos Dimitromanolakis, Jingxiong Xu, Agnieszka Król, Laurent Briollais , BMC Bioinformatics , 2019RFree
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Robust Statistical Methods in R Using the WRS2 Package
Patrick Mair, Rand R. Wilcox , Behavior research methods , 2019RFree
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Genomic prediction using subsampling
Alencar Xavier, Shizhong Xu, William M. Muir, Katy Martin Rainey , BMC Bioinformatics , 2017RFree
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Using Introspection to Collect Provenance in R
Barbara Lerner, Emery R. Boose, Luis Perez , Informatics , 2018RFree
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Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
Michael E. Alfaro, Francesco Santini, +5 authors Luke J. Harmon , Proceedings of the National Academy of Sciences… , 2009RFree
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polyRAD: Genotype calling with uncertainty from sequencing data in polyploids and diploids
Lindsay V. Clark, Alexander E. Lipka, Erik J. Sacks , G3 , 2019RFree
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A Unified Framework for Structured Graph Learning via Spectral Constraints
Sandeep Kumar, Jiaxi Ying, José Vinícius de Miranda Cardoso, Daniel Palomar , ArXiv , 2019RFree
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An algorithm for morphological phylogenetic analysis with inapplicable data
Martin D Brazeau, Thomas Guillerme, Martin R Smith , Systematic biology , 2019RFree
-
Supervised multiblock sparse multivariable analysis with application to multimodal brain imaging genetics
Atsushi Kawaguchi, Fumio Yamashita , Biostatistics , 2017RFree
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Sparse Portfolios for High-Dimensional Financial Index Tracking
Konstantinos Benidis, Yiyong Feng, Daniel Pérez Palomar , IEEE Transactions on Signal Processing , 2018RFree
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SCRIP: Successive Convex Optimization Methods for Risk Parity Portfolio Design
Yiyong Feng, Daniel Pérez Palomar , IEEE Transactions on Signal Processing , 2015RFree
-
TSrepr R package: Time Series Representations
Peter Laurinec , J. Open Source Software , 2018RFree
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metaSEM: An R Package for Meta-Analysis using Structural Equation Modeling
Mike W.-L. Cheung , Front. Psychol. , 2014RFree
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Learning Large-Scale Bayesian Networks with the sparsebn Package
Bryon Aragam, Jiaying Gu, Qing Zhou , ArXiv , 2017RFree
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Empirical Transition Matrix of Multi-State Models: The etm Package
Arthur Allignol, Martin Schumacher, Jan Beyersmann , JOURNAL OF STATISTICAL SOFTWARE , 2011RFree
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Minerva and minepy: a C engine for the MINE suite and its R, Python and MATLAB wrappers
Davide Albanese, Michele Filosi, Roberto Visintainer, Samantha Riccadonna, Giuseppe Jurman, Cesare Furlanello , Bioinformatics , 2013RFree
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