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Science NestCategoriesBehavior and Systematics
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Title Title
Date Date
  • Time and ecological resilience: can diurnal animals compensate for climate change by shifting to nocturnal activity?

    Ofir Levy, Tamar Dayan, Warren P. Porter, Noga Kronfeld-Schor , Ecological Monographs ,  2018
    Fortran

    Free

  • A meta-analysis of changes in bacterial and archaeal communities with time

    Ashley Shade, J Gregory Caporaso, Jo Handelsman, Rob Knight, Noah Fierer , ISME Journal ,  2013
    R

    Free

  • Individual immune selection pressure has limited impact on seasonal influenza virus evolution

    Alvin X. Han, Sebastian Maurer-Stroh,Colin A. Russell , Nature Ecology and Evolution ,  2018
    Jupyter Notebook

    Free

  • Root microbiota assembly and adaptive differentiation among European Arabidopsis populations

    Thorsten Thiergart, Paloma Durán, Thomas Ellis, Nathan Vannier, Ruben Garrido-Oter, Eric Kemen , Nature Ecology and Evolution ,  2019
    R

    Free

  • Tipping points in the dynamics of speciation

    Patrik Nosil, Jeffrey L. Feder, Samuel M. Flaxman, Zachariah Gompert , Nature Ecology and Evolution ,  2017
    Mathematica

    Free

  • Social support drives female dominance in the spotted hyaena

    Colin Vullioud, Eve Davidian, Bettina Wachter, François Rousset, Alexandre Courtiol, Oliver P. Höner , Nature Ecology and Evolution ,  2018
    R

    Free

  • Widespread inhibition of daytime ecosystem respiration

    Trevor F. Keenan, Mirco Migliavacca, Dario Papale, Dennis Baldocchi, Markus Reichstein, Margaret Torn & Thomas Wutzler , Nature Ecology and Evolution ,  2019
    MATLAB

    Free

  • Accounting for Phylogenetic Uncertainty in Biogeography: A Bayesian Approach to Dispersal-Vicariance Analysis of the Thrushes

    Johan A A Nylander,Urban Olsson,Per Alström,Isabel Sanmartín , Systematic Biology ,  2008
    Perl

    Free

  • Escaping the evolutionary trap? Sex chromosome turnover in basilisks and related lizards (Corytophanidae: Squamata)

    Stuart V. Nielsen , Irán Andira Guzmán-Méndez , Tony Gamble , Madison Blumer , Brendan J. Pinto , Lukáš Kratochvíl, Michail Rovatsos , Molecular Biology and Evolution ,  2019
    Python

    Free

  • Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens

    Jing Wang, Nathaniel R. Street, Douglas G. Scofield, Pär K. Ingvarsson , Molecular Biology and Evolution ,  2016
    Shell

    Free

  • A Fast Algorithm for Joint Reconstruction of Ancestral Amino Acid Sequences

    Tal Pupko, Itsik Pe, Ron Shamir, Dan Graur , Molecular Biology and Evolution ,  2000
    Python

    Free

  • Linking phytoplankton community metabolism to the individual size distribution

    Daneil Padfield, Angus Buckling, Ruth Warfield, Chris Lowe, Gabriel Yvon-Durocher , Ecology Letters ,  2018
    R

    Free

  • Ecology Under Lake Ice

    Stephaine E. Hamptopn, Aaron W. E. Galloway, et al , Ecology Letters ,  2016
    R

    Free

  • Size-based ecological interactions drive food web responses to climate warming

    Max Lindmark, Jan Ohlberger, Magnus Huss, Anna Gårdmark , Ecology Letters ,  2019
    R

    Free

  • Metabloic compensation constrains the temperature dependence of gross primary production

    Daniel Padfield, Chris Lowe, Angus Buckling, Richard Ffrench-Constant , Ecology Letters ,  2017
    R

    Free

  • Scaling metabolism from individuals to reef-fish communities at broad spatial scales

    D.R. Barneche, M.Kulbicki, S.R. Floeter, A.M. Friendlander, J.Maina, A.P Allen , Ecology Letters ,  2014
    R

    Free

  • The ecohydrological context of drought and classification of plant responses

    Xue Feng, David D. Sckerly, Todd E. Dawson, Stefano Manzoni, Rob P.Skelton, Giulia Vico, Sally E. Thompson , Ecology Letters ,  2018
    Python

    Free

  • Traits linked with species invasivness and community invasiblity vary with time, stage and indicator of invasion in a long-term grassland experiment

    Jane A. Catford, Annabel L. Smith, Peter D. Wragg, et al , Ecology Letters ,  2019
    R

    Free

  • Trasnlucent windows: how uncertainty in competitive interactions impacts detection of community pattern

    Rafael D'Andrea, Annette Ostling, James P. O'Dwyer , Ecology Letters ,  2018
    R

    Free

  • Predicting the spread of all invasive forest pests in the United States

    Emma J. Hudgins, Andrew M. Liebhlod, Brian Leung , Ecology Letters ,  2017
    R

    Free

  • Network spandrels reflect ecological assembly

    Daniel S. Maynard, Carlos A. Serván, Stefano Allesina , Ecology Letters ,  2018
    R

    Free

  • Abunance of common species, not species richness, drives delivery of a real-world ecosystem service

    Rachael Winfree, Jeremy W. Fox, Neal M. Williams, James R. Reilly, Daniel P.Cariveau , Ecology Letters ,  2015
    R

    Free

  • Blobal photsynthetic capacity is optimized to the environment

    Nicholas G. Smith, Trevor F. Keenan, I.Colin Prentice, Han Wang , Ecology Letters ,  2019
    R

    Free

  • ENMTools 1.0: an R package for comparative ecological biogeography

    Dan L. Warren, Nicholas J. Matzke, Marcel Cardillo, John B. Baumartner , Trends in Ecology and Evolution ,  2021
    R

    Free

  • Do baseline glucocorticoids presict fitness? Trends in Ecology and Evolution

    Frances Bonier, Paul R. Martin, Ignacio T. Moore, John C. Wingfield , Trends in Ecology and Evolution ,  2009
    HTML

    Free

  • On Fitting the Poisson Lognormal Distribution to Species-Abundance Data

    M.G. Bulmer , Annual Review of Ecology, Evolution, and Systematics ,  1974
    Pascal

    Free

  • Time to get moving: assisted gene flow of forest trees

    Sally N. Aitken, Jordan B. Bemmels , Annual Review of Ecology, Evolution, and Systematics ,  2015
    Rebol

    Free

  • Unifying Species Diversity, Phylogenetic Diversity, Functional Diversity, and Related Similarity and Differentiation Measures Through Hill Numbers

    Anne Chao, Chun-Huo Chiu, Lou Jost , Annual Review of Ecology, Evolution, and Systematics ,  2014
    R

    Free

  • Moderm computational approaches for analysing molecular genetic variation data

    Paul Marjoram, Simon Tavaré , Annual Review of Ecology, Evolution, and Systematics ,  2006
    Python

    Free

  • Mapping of Multiple Complementary Sex Determination Loci in a Parasitoid Wasp

    Cyril Matthey-Doret, Casper J can der Kooi, Daniel L Jeffries, Jens Bast, Alice B Dennis, Christopher Vorburger, Tanja Schwander , Genome Biology ,  2019
    Shell

    Free

  • Evolution of Dosage Compensation in Anolis Carolinensis, a Reptile with XX.XY Chromosomal Sex Determination

    Shawn M.Rupp, Timothy H. Webster, Kimberly C.Olney, Elizabeth D.Hutchins, Kenro Kusumi, Melissa A. Wilson Sayres , Genome Biology ,  2016
    Python

    Free

  • The somatic mutation landscape of the human body

    Pablo E. García-Nieto, Ashby J. Morrison, Hunter B. Fraser , Genome Biology ,  2019
    R

    Free

  • Comparative assessment of methods for aligning multiple genome sequences

    Xiaoyu Chen, Martin Tompa , Genome Biology ,  2010
    C

    Free

  • An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BedArray

    Lucas A. Salas, Devin C. Koestler, Rondi A. Butler, Helen M.Hansen, John K. Wiencke, Karl T. Kelsey, Brock C. Christensen , Genome Biology ,  2018
    R

    Free

  • Comparison of computational methods for the identification of topologically assocaiting domains

    Marie Zufferey, Daniele Tavernari, Elisa Oricchio, Giovanni Ciriello , Genome Biology ,  2018
    R

    Free

  • Single-cell transcriptomics unveils gene regulatory network plasticity

    Giovanni Iancono, Ramon Massoni-Badosa, Holger Heyn , Genome Biology ,  2019
    HTML

    Free

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