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Science NestCategoriesAgronomy and Crop Science
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Title Title
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  • FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

    Nhu H. Nguyen, Zewei Song, Scott T. Bates, Sara Branco, Leho Tedersoo, Jon Menke, Jonathan S. Schilling, Peter G. Kennedy , Biology and Fertility of Soils ,  2015
    Python

    Free

  • FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

    Nhu H. Nguyen, Zewei Song, Scott T. Bates, Sara Branco, Leho Tedersoo, Jon Menke, Jonathan S. Schilling, Peter G. Kennedy , European Journal of Plant Pathology ,  2015
    Python

    Free

  • Toward integration of genomic selection with crop modelling: the development of an integrated approach to predicting rice heading dates

    Akio Onogi, Maya Watanabe, Toshihiro Mochizuki, Takeshi Hayashi, Hiroshi Nakagawa, Toshihiro Hasegawa, Hiroyoshi Iwata , Theoretical and Applied Genetics ,  2016
    R

    Free

  • Single and multiple phenotype QTL analyses of downy mildew resistance in interspecific grapevines

    Konstantin Divilov, Paola Barba, Lance Cadle-Davidson, Bruce I. Reisch , Theoretical and Applied Genetics ,  2018
    R

    Free

  • The dynamic life of arbuscular mycorrhizal fungal symbionts

    Elizabeth M. Bach, Giselle Narvaez‐Rivera, Kira Murray, Jonathan T. Bauer, Kirsten S. Hofmockel , GCB Bioenergy ,  2018
    SAS

    Free

  • Response of macrophyte traits to herbivory and neighboring species: integration of the functional trait framework in the context of ecological invasions

    Lise Thouvenot, Benoit Gauzens, Jacques Haury, Gabrielle Thiébaut , Plant Science ,  2019
    R

    Free

  • Temperature controls phenology in continuously flowering Protea species of subtropical Africa

    Barnabas H. Daru, Matthew M. Kling, Emily K. Meineke, Abraham E. Wyk , Plant Science ,  2019
    R

    Free

  • Light modulates ethylene synthesis, signaling, and downstream transcriptional networks to control plant development.

    Alexandria F. Harkey, Gyeong Mee Yoon, Dong Hye Seo, Alison DeLong, Gloria K. Muday , Plant Science ,  2019
    HTML

    Free

  • Parental Expression Variation of Small RNAs Is Negatively Correlated with Grain Yield Heterosis in a Maize Breeding Population

    Felix Seifert, Alexander Thiemann, Robert Grant-Downton, Susanne Edelmann, Dominika Rybka, Tobias A. Schrag, Matthias Frisch, Hugh G. Dickinson, Albrecht E. Melchinger, Stefan Scholten , Plant Science ,  2018
    Java

    Free

  • Improving development efficiency through decision analysis: Reservoir protection in Burkina Faso

    Denis Lanzanova, Cory Whitney, Keith Shepherd, Eike Luedeling , Agricultural Water Management ,  2019
    HTML

    Free

  • Spatial patterns of seasonal crop production suggest coordination within and across dryland agricultural systems of Hawaiʻi Island

    Aurora K. Kagawa-Viviani, Noa Kekuewa Lincoln, Seth Quintus, Matthew P. Lucas, Thomas W. Giambelluca , Agricultural Systems ,  2018
    R

    Free

  • Plant factories; crop transpiration and energy balance

    Luuk Graamans, Andy van den Dobbelsteen, Esther Meinen, Cecilia Stanghellini , Agricultural Systems ,  2017
    Python

    Free

  • Genomics and Taxonomy in Diagnostics for Food Security: soft-rotting enterobacterial plant pathogens

    Leighton Pritchard, Rachel H. Glover, Sonia Humphris, John G. Elphinstone, Ian K. Toth , Food Security ,  2015
    Makefile

    Free

  • The bias of a two-dimensional view: comparing two-dimensional and three-dimensional mesophyll surface area estimates using noninvasive imaging

    Guillaume Théroux‐Rancourt, J. Mason Earles, Matthew E. Gilbert, Maciej A. Zwieniecki, C. Kevin Boyce, Andrew J. McElrone, Craig R. Brodersen , Journal of Plant Physiology ,  2017
    R

    Free

  • An in-field automatic wheat disease diagnosis system

    Jiang Lu, Jie Hu, Guannan Zhao, Fenghua Mei, Changshui Zhang , Computers and Electronics in Agriculture ,  2017
    Python

    Free

  • Deep learning for classification and severity estimation of coffee leaf biotic stress

    José G.M. Esgario, Renato A. Krohling, José A. Ventura , Computers and Electronics in Agriculture ,  2020
    JavaScript

    Free

  • Segmentation of lettuce in coloured 3D point clouds for fresh weight estimation

    Anders Krogh Mortensen, Asher Bender, Brett Whelan, Margaret M. Barbour, Salah Sukkarieh, Henrik Karstoft, René Gislum , Computers and Electronics in Agriculture ,  2018
    C++

    Free

  • Application note: An open-source JavaScript library to simulate dairy cows and young stock, their growth, requirements and diets

    J. Vaillant, L. Baldinger , Computers and Electronics in Agriculture ,  2015
    JavaScript

    Free

  • Computing uncertainty in the optimum nitrogen rate using a generalized cost function

    Tyler J. Nigon, Ce Yang, David J. Mulla, Daniel E. Kaiser , Computers and Electronics in Agriculture ,  2019
    Jupyter Notebook

    Free

  • Storage time prediction of pork by Computational Intelligence

    Ana Paula A.C. Barbon, Sylvio Barbon, Rafael Gomes Mantovani, Estefânia Mayumi Fuzyi, Louise Manha Peres, Ana Maria Bridi , Computers and Electronics in Agriculture ,  2016
    R

    Free

  • Weed detection in soybean crops using ConvNets

    Alessandro dos Santos Ferreira, Daniel Matte Freitas, Gercina Gonçalves da Silva, Hemerson Pistori, Marcelo Theophilo Folhes , Computers and Electronics in Agriculture ,  2017
    Jupyter Notebook

    Free

  • Detection of grapevine yellows symptoms in Vitis vinifera L. with artificial intelligence

    Albert Cruz, Yiannis Ampatzidis, Roberto Pierro, Alberto Materazzi, Alessandra Panattoni, Luigi De Bellis, Andrea Luvisi , Computers and Electronics in Agriculture ,  2018
    CSS

    Free

  • Rice Classification Using Spatio-Spectral Deep Convolutional Neural Network

    Itthi Chatnuntawech, Kittipong Tantisantisom, Paisan Khanchaitit, Thitikorn Boonkoom, Berkin Bilgic, Ekapol Chuangsuwanich , Computers and Electronics in Agriculture ,  2019
    Python

    Free

  • Illumination invariant segmentation of vegetation for time series wheat images based on decision tree model

    Wei Guo, Uday K. Rage, Seishi Ninomiya , Computers and Electronics in Agriculture ,  2013
    Matlab

    Free

  • A computer model for particle-like simulation in broiler houses

    B.H. Cervelin, D. Conti, M.A. Diniz-Ehrhardt, J.M. Martínez , Computers and Electronics in Agriculture ,  2017
    Fortran

    Free

  • A new SAS program for behavioral analysis of electrical penetration graph data

    Timothy A. Ebert, Elaine A. Backus, Miguel Cid, Alberto Fereres, Michael E. Rogers , Computers and Electronics in Agriculture ,  2015
    SAS

    Free

  • A new SAS program for behavioral analysis of electrical penetration graph data

    Timothy A. Ebert, Elaine A. Backus, Miguel Cid, Alberto Fereres, Michael E. Rogers , Communications in Biometry and Crop Science ,  2015
    SAS

    Free

  • Fruit detection, yield prediction and canopy geometric characterization using LiDAR with forced air flow

    Jordi Gené-Mola, Eduard Gregorio, Fernando Auat Cheein, Javier Guevara, Jordi Llorens, Ricardo Sanz-Cortiella, Alexandre Escolà, Joan R. Rosell-Polo , Computers and Electronics in Agriculture ,  2019
    MATLAB

    Free

  • An open-source spatial analysis system for embedded systems

    Andre Luiz de Freitas Coelho, Daniel Marçal de Queiroz, Domingos Sárvio Magalhães Valente, Francisco de Assis de Carvalho Pinto , Computers and Electronics in Agriculture ,  2018
    Python

    Free

  • Testing Database-Centric Applications for Causes of Database Deadlocks

    Mark Grechanik, B.M. Mainul Hossain, Ugo Buy , Computers and Electronics in Agriculture ,  2013
    Scala

    Free

  • Weed detection in soybean crops using ConvNets

    Alessandro dos Santos Ferreira, Daniel Matte Freitas, Gercina Gonçalves da Silva, Hemerson Pistori, Marcelo Theophilo Folhes , Computers and Electronics in Agriculture ,  2017
    Python

    Free

  • Comparative accuracies of artificial neural networks and discriminant analysis in predicting forest cover types from cartographic variables

    Jock A. Blackard, Denis J. Dean , Computers and Electronics in Agriculture ,  2002
    Jupyter Notebook

    Free

  • Comparison of ground cover estimates from experiment plots in cotton, sorghum and sugarcane based on images and ortho-mosaics captured by UAV

    Tao Duan, Bangyou Zheng, Wei Guo, Seishi Ninomiya, Yan Guo, Scott C. Chapman , Functional Plant Biology ,  2016
    MATLAB

    Free

  • Non-destructive Detection of Blueberry Skin Pigments and Fruit Intrinsic Qualities Based on Deep Learning

    Changhong Mu, Zebin Yuan, Xiuqin Ouyang, Pu Sun, Bo Wang , Journal of the Science of Food and Agriculture ,  2020
    MATLAB

    Free

  • Complex responses of global insect pests to climate change

    Philipp Lehmann, Tea Ammunét, Madeleine Barton, Andrea Battisti, Sanford D Eigenbrode, Jane Uhd Jepsen, Gregor Kalinkat, Seppo Neuvonen, Pekka Niemelä, John S Terblanche, Bjørn Økland, Christer Björkman , Agronomy ,  2020
    R

    Free

  • A modular and parallelized watershed modeling framework

    Liang-Jun Zhu, Junzhi Liu, Cheng-Zhi Qin, A-Xing Zhu , Journal of Soils and Water Conservation ,  2019
    C++

    Free

  • Best Management Practices Optimization at Watershed Scale: Incorporating Spatial Topology among Fields

    Mazdak Arabi, Rao S. Govindaraju, Mohamed M. Hantush , Journal of Soils and Water Conservation ,  2006
    C++

    Free

  • Transcriptome profiling helps to identify potential and true molecular switches of stealth to brute force behavior in Pectobacterium atrosepticum during systemic colonization of tobacco plants

    Vladimir Gorshkov, Rim Gubaev, Olga Petrova, Amina Daminova, Natalia Gogoleva, Marina Ageeva, Olga Parfirova, Maxim Prokchorchik, Yevgeny Nikolaichik, Yuri Gogolev , European Journal of Plant Pathology ,  2018
    R

    Free

  • Be-Breeder – Learning: a new tool for teaching and learning plant breeding principles

    Roberto Fritsche-Neto, Filipe Inácio Matias , Crop Breeding and Applied Biotechnology ,  2016
    Roff

    Free

  • MARPLE, a point-of-care, strain-level disease diagnostics and surveillance tool for complex fungal pathogens

    Guru V. Radhakrishnan, Nicola M. Cook, Vanessa Bueno-Sancho, Clare M. Lewis, Antoine Persoons, Abel Debebe Mitiku, Matthew Heaton, Phoebe E. Davey, Bekele Abeyo, Yoseph Alemayehu, Ayele Badebo, Marla Barnett, Ruth Bryant, Jeron Chatelain, Xianming Chen, Suomeng Dong, Tina Henriksson, Sarah Holdgate, Annemarie F. Justesen, Jay Kalous, Zhensheng Kang, Szymon Laczny, Jean-Paul Legoff, Driecus Lesch, Tracy Richards, Harpinder S. Randhawa, Tine Thach, Meinan Wang, Mogens S. Hovmøller, David P. Hodson, Diane G. O. Saunders , Plant Disease ,  2019
    Python

    Free

  • Nitrogen Fertilizers Shape the Composition and Predicted Functions of the Microbiota of Field-Grown Tomato Plants

    Federica Caradonia, Domenico Ronga, Marcello Catellani, Cleber Vinícius Giaretta Azevedo, Rodrigo Alegria Terrazas, Senga Robertson-Albertyn, Enrico Francia, Davide Bulgarelli , Rhizosphere ,  2019
    R

    Free

  • Unraveling the Composition of the Root-Associated Bacterial Microbiota of Phragmites australis and Typha latifolia

    Laura Pietrangelo, Antonio Bucci, Lucia Maiuro, Davide Bulgarelli, Gino Naclerio , Rhizosphere ,  2018
    R

    Free

  • Production Rigidity, Input Lumpiness, Efficiency, and the Technological Hurdle of Quebec Dairy Farms

    Bruno Larue, Alphonse Singbo, Sébastien Pouliot , Canadian Journal of Agricultural Economics ,  2017
    Stata

    Free

  • Antibiotic-Induced Alterations of the Murine Gut Microbiota and Subsequent Effects on Colonization Resistance against Clostridium difficile

    Alyxandria M. Schubert, Hamide Sinani, Patrick D. Schloss , Spore ,  2015
    R

    Free

  • Lifecycle Progression and Sexual Development of the Apicomplexan Parasite Cryptosporidium parvum

    Jayesh Tandel, Elizabeth D. English, Adam Sateriale, Jodi A. Gullicksrud, Daniel P. Beiting, Megan C. Sullivan, Brittain Pinkston, Boris Striepen , Spore ,  2019
    HTML

    Free

  • Empirical evidence that metabolic theory describes the temperature dependency of within-host parasite dynamics

    Devin Kirk, Natalie Jones, Stephanie Peacock, Jessica Phillips, Péter K. Molnár, Martin Krkošek, Pepijn Luijckx , Spore ,  2018
    R

    Free

  • Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements

    Jesper Svedberg, Sara Hosseini, Jun Chen, Aaron A. Vogan, Iva Mozgova, Lars Hennig, Pennapa Manitchotpisit, Anna Abusharekh, Thomas M. Hammond, Martin Lascoux, Hanna Johannesson , Spore ,  2018
    Python

    Free

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